10X Visium - Human Cervical Cancer

Gene expression library of Human Cervical Cancer (Visium FFPE) using the Human Whole Transcriptome Probe Set

10x_datasets

Info

10x_datasets/human_cervical_cancer_visium
10x Genomics (2022)
77.12 MiB
20-08-2024
2781 × 13866

Used in

Description

5 µm section from squamous cell carcinoma of human cervical cancer. FFPE tissue purchased from Discovery Life Sciences.

Preview

dataset is an AnnData object with n_obs × n_vars = 2781 × 13866 with slots:

Reference

Name Description Type Data type Size
var
feature_id Unique identifier for the feature, usually a ENSEMBL gene id. vector object 13866
feature_name A human-readable name for the feature, usually a gene symbol. vector object 13866
layers
counts Raw counts sparsematrix float32 2781 × 13866
uns
dataset_description Long description of the dataset. atomic str 1
dataset_id A unique identifier for the dataset. This is different from the obs.dataset_id field, which is the identifier for the dataset from which the cell data is derived. atomic str 1
dataset_name A human-readable name for the dataset. atomic str 1
dataset_organism The organism of the sample in the dataset. atomic str 1
dataset_reference Bibtex reference of the paper in which the dataset was published. atomic str 1
dataset_summary Short description of the dataset. atomic str 1
dataset_url Link to the original source of the dataset. atomic str 1

References

10x Genomics. 2022. “Human Cervical Cancer (FFPE).” https://www.10xgenomics.com/datasets/human-cervical-cancer-1-standard.